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Development of Genomic and Genetic Tools for Foxtail Millet, and Use of These Tools in the Improvement of Biomass Production for Bioenergy Crops

Author :
Publisher :
Page : pages
File Size : 25,38 MB
Release : 2011
Category :
ISBN :

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The overall aim of this research was to develop genomic and genetic tools in foxtail millet that will be useful in improving biomass production in bioenergy crops such as switchgrass, napier grass, and pearl millet. A variety of approaches have been implemented, and our lab has been primarily involved in genome analysis and quantitative genetic analysis. Our progress in these activities has been substantially helped by the genomic sequence of foxtail millet produced by the Joint Genome Institute (Bennetzen et al., in prep). In particular, the annotation and analysis of candidate genes for architecture, biomass production and flowering has led to new insights into the control of branching and flowering time, and has shown how closely related flowering time is to vegetative architectural development and biomass accumulation. The differences in genetic control identified at high and low density plantings have direct relevance to the breeding of bioenergy grasses that are tolerant of high planting densities. The developmental analyses have shown how plant architecture changes over time and may indicate which genes may best be manipulated at various times during development to obtain required biomass characteristics. This data contributes to the overall aim of significantly improving genetic and genomic tools in foxtail millet that can be directed to improvement of bioenergy grasses such as switchgrass, where it is important to maximize vegetative growth for greatest biomass production.

Plant Breeding Reviews, Volume 35

Author : Jules Janick
Publisher : John Wiley & Sons
Page : 323 pages
File Size : 11,5 MB
Release : 2011-10-07
Category : Science
ISBN : 1118100492

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Plant Breeding Reviews presents state-of-the-art reviews on plant genetics and the breeding of all types of crops by both traditional means and molecular methods. Many of the crops widely grown today stem from a very narrow genetic base; understanding and preserving crop genetic resources is vital to the security of food systems worldwide. The emphasis of the series is on methodology, a fundamental understanding of crop genetics, and applications to major crops. The series is sponsored by the American Society for Horticultural Science and appears in the form of one or two volumes per year.

The Foxtail Millet Genome

Author : Manoj Prasad
Publisher : Springer
Page : 159 pages
File Size : 24,18 MB
Release : 2017-11-25
Category : Science
ISBN : 3319656171

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This book presents up-to-date information on foxtail millet genomics, with a particular focus on its agronomic importance, genome architecture, marker development, evolutionary and diversity studies, comparative genomics and stress biology. The topics discussed have the potential to open up a new era of crop improvement in foxtail millet and other related grass species. Foxtail millet (Setaria italica L.) is the oldest domesticated crop in the world (domesticated >8700 years ago) and it has been extensively grown in the semi-arid regions of Asia, Europe and the Americas as a food and fodder crop ever since. Further, as a C4 crop with close genetic relatedness to several biofuel grasses, foxtail millet has been promoted as a model plant. In view of its importance, the US Department of Energy Joint Genome Institute and Beijing Genomics Institute have independently sequenced the genome of foxtail millet. The availability of the draft genome sequence has advanced the genomics and genetics of this important crop, resulting in the development of large-scale genome-wide molecular markers and demonstration of their utility in genomics-assisted breeding, as well as the identification of the molecular and biological roles of several stress-responsive gene families in connection with abiotic stress tolerance. In addition, several open access databases have been developed to make these resources for crop improvement through structural and functional genomics widely available.

Millets and Sorghum

Author : Jagannath V. Patil
Publisher : John Wiley & Sons
Page : 596 pages
File Size : 49,12 MB
Release : 2016-12-20
Category : Technology & Engineering
ISBN : 1119130778

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Millets and sorghum are extremely important crops in many developing nations and because of the ability of many of them to thrive in low-moisture situations they represent some exciting opportunities for further development to address the continuing and increasing impact of global temperature increase on the sustainability of the world’s food crops. The main focus of this thorough new book is the potential for crop improvement through new and traditional methods, with the book’s main chapters covering the following crops: sorghum, pearl millet, finger millet, foxtail milet, proso millet, little millet, barnyard millet, kodo millet, tef and fonio. Further chapters cover pests and diseases, nutritional and industrial importance, novel tools for improvement, and seed systems in millets. Millets and Sorghum provides full and comprehensive coverage of these crucially important crops, their biology, world status and potential for improvement, and is an essential purchase for crop and plant scientists, and food scientists and technologists throughout the developed and developing world. All libraries in universities and research establishment where biological and agricultural sciences are studied and taught should have copies of this important book on their shelves.

Omics of Climate Resilient Small Millets

Author : Ramesh Namdeo Pudake
Publisher : Springer Nature
Page : 363 pages
File Size : 24,92 MB
Release : 2022-07-15
Category : Technology & Engineering
ISBN : 9811939071

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This edited book covers all aspects of omics approaches used for the varietal improvement of millets in changing climatic conditions. Millets are the collection of small-grained cereal grasses, that are grown for human carbohydrate needs. They are among the oldest crops, mainly divided into two groups – Major and small millets based on seed size. Small millets are earlier considered orphan crops, but recently due to their nutritional values, they are getting importance in cultivation. This book explores the genomics, transcriptomics, proteomics, metabolomics, bioinformatics, and other omics tools that are being widely used to get a clear understanding of mechanistic approaches taken by plant genes to tolerate stress. Various reports are published based on field breeding on these crops, and recently the genome of some of the small millets is released, and many omics studies are published related to its application in varietal improvements. This book reviewed all those recent studies and is of interest to research students, plant breeding scientists, teachers that are working in agriculture and plant biotech universities. Along with this, the book serves as reference material for undergraduate and graduate students of agriculture, and biotechnology. National and international agricultural scientists, policymakers will also find this to be a useful read.

Development and Utilization of Genomic Resources for Genetic Improvement of Proso Millet (Panicum Miliaceum L.)

Author : Santosh Ghashiram Rajput
Publisher :
Page : 132 pages
File Size : 15,97 MB
Release : 2015
Category :
ISBN : 9781321953183

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Proso millet (2n=4x=36), an allotetraploid self-pollinated cereal with highest water-use efficiency, is the best rotational crop in dryland production system in the semi-arid High Plains of the USA and elsewhere in the world. Breeding and genomic research in this crop is very limited. Overall goal of this dissertation is to develop proso millet genetic and genomic resources (germplasm characterization, molecular marker development, and QTL mapping) for the genetic improvement through conventional and molecular breeding. For marker development, a total of 348 SSRs were developed for proso millet using cross-species genomic resources. In genetic diversity, 90 diverse genotypes, considered as proso millet core collection, were clustered into three groups based on 1287 SSR marker alleles, amplified by the 100 SSR markers. Genotypes were clustered corresponding to their geographic origin, pedigree and morpho-agronomic traits with few exceptions. In germplasm characterization, seventy-seven of the 90 genotypes showed a wide range of variation for nine morpho-agronomic traits and formed six clusters based on the phenotypic data. Genotypes were significantly different for all the traits across locations and many traits were highly correlated. Genotypes with resistance to lodging and grain shattering, two very important traits in proso millet breeding, were identified. The fourth objective, the first genetic linkage map of proso millet was developed using 833 GBS-SNP markers in 93 RILs and the map consisted 18 major and 84 minor linkage groups. The 18 major linkage groups spanned 2137 cM of proso millet genome with an average density of 18 cM. A total of 17 QTLs (LOD = 2.55 to 3.98) for seven morpho-agronomic traits were detected, which explained 13.2 to 34.7% phenotypic variance. DNA markers flanking the QTLs were identified, which could be useful in marker-assisted selection of these traits. The results of these studies will have significant utilization in proso millet breeding, genetics, and genomics research.

Cereals and Millets

Author : Chittaranjan Kole
Publisher : Springer Science & Business Media
Page : 366 pages
File Size : 20,87 MB
Release : 2006-10-28
Category : Science
ISBN : 354034389X

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Part of the seven-volume series Genome Mapping and Molecular Breeding in Plants, this book covers Cereals and Millets, which provide staple food for most of the earth’s population. This book includes chapters on rice, wheat, maize, barley, oats, rye, sorghum, pearl millet, foxtail millet and finger millet. The emphasis is on advanced research on the major crops, including the model plants maize and rice, as well as on future road maps of genomic research for the less-often considered but equally deserving cereals and millets.

Handbook of Bioenergy Crops

Author : N. El Bassam
Publisher : Earthscan
Page : 545 pages
File Size : 25,85 MB
Release : 2010
Category : Business & Economics
ISBN : 1849774781

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This completely revised second edition includes new information on biomass in relation to climate change, new coverage of vital issues including the "food versus fuel" debate, and essential new information on "second generation" fuels and advances in conversion techniques. The book begins with a guide to biomass accumulation, harvesting, transportation and storage, as well as conversion technologies for biofuels. This is followed by an examination of the environmental impact and economic and social dimensions, including prospects for renewable energy. The book then goes on to cover all the main potential energy crops.

Millets and Pseudo Cereals

Author : Mohar Singh
Publisher : Woodhead Publishing
Page : 222 pages
File Size : 26,31 MB
Release : 2020-10-05
Category : Technology & Engineering
ISBN : 0128200898

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Millets and Pseudo Cereals is the first comprehensive resource to focus on the potential crop improvements through genetic enhancements. The choice of food crop for a region is primarily determined by the conditions of climate and soil. Once labelled as orphan crops, millets and pseudo-cereals are now known as miracle grains due to their adaptation to harsh conditions and high nutritional quality. Small millets and pseudo-cereals are now seen to occupy special niches through their ability to adapt to challenging conditions. These crops have a comparative advantage in marginal lands where they withstand stress conditions and contribute to sustainable production. They also contribute to the diversity-richness and production stability of agro-ecosystems. Millets include sorghum, pearl millet, finger millet, foxtail millet, proso millet, barnyard millet, little millet and kodo millet while the other group which are not cereals but consumed as cereals and generally referred as pseudo-cereals comprises of grain amaranths, buckwheat and chenopods. Millets and Pseudo Cereals presents current information on the genetic architecture of important economic traits and the genomic resources for gene enabled breeding. This compilation contains information on the global status, available germplasm resources, nutritional value, breeding advancements, genomics applications and sustainability of agriculture through millets and pseudo-cereals cultivation. This book is a valuable resource for those conducting research and exploring new areas for advancing crop genetic understanding. Explores the current challenges of pseudo-cereal production and how that can be overcome by developing genetic and breeding resources using appropriate germplasm Provides holistic information on millets and pseudo-cereals Features global perspectives from an international contributing team of authors

Millet Rhizosphere

Author : Ramesh Namdeo Pudake
Publisher : Springer Nature
Page : 355 pages
File Size : 35,47 MB
Release : 2023-09-11
Category : Technology & Engineering
ISBN : 981992166X

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This edited volume is the first book that explicitly explains the link between the extraordinarily small-scale microbial processes and the growth and yield attributes of millet crops. This book includes chapters emphasizing on the effects of rhizosphere biology on long-term millet crop management. Millets are a collection of small-grained cereal grasses that are grown for human carbohydrate needs. They are among the oldest crops, mainly divided into two groups: major and small millets based on seed size. Major millets are composed of sorghum (Sorghum bicolor) and pearl millet (Pennisetum glaucum); while small millets are composed of six species that includes finger millet (Eleusine coracana (L.)), little millet (Panicum sumatrense), kodo millet (Paspalum scrobiculatum (L.)), foxtail millet (Setaria italica (L.)), barnyard millet (Echinochloa frumentacea (L.)), and proso millet (Panicum miliaceum (L.). These crops are earlier considered as orphan crops, but recently due to their nutritional values it is gaining the importance. Various reports are published based on role of rhizosphere on growth and health of these crops. The rhizosphere being a dynamic interface among the plant roots and soil microbes provides a number of advantages to the millets too. The soil properties in rhizospheric region are also different as compared to the bulk soil. This book discovers the functional attributes of rhizosphere in promoting the healthy growth of millet crop and achieving higher yield during the changing climatic condition. This book is of interest to university teachers, scientists working in the millets, and policymakers in agricultural departments. Also, the book serves as additional reading material for undergraduate and graduate students of agriculture, biotechnology, microbiology, genetics, and soil science.