[PDF] Accelerating Radiation Dose Calculation With High Performance Computing And Machine Learning For Large Scale Radiotherapy Treatment Planning eBook

Author : Ryan Neph
Publisher :
Page : 156 pages
File Size : 33,19 MB
Release : 2020
Category :
ISBN :

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Radiation therapy is powered by modern techniques in precise planning and execution of radiation delivery, which are being rapidly improved to maximize its benefit to cancer patients. In the last decade, radiotherapy experienced the introduction of advanced methods for automatic beam orientation optimization, real-time tumor tracking, daily plan adaptation, and many others, which improve the radiation delivery precision, planning ease and reproducibility, and treatment efficacy. However, such advanced paradigms necessitate the calculation of orders of magnitude more causal dose deposition data, increasing the time requirement of all pre-planning dose calculation. Principles of high-performance computing and machine learning were applied to address the insufficient speeds of widely-used dose calculation algorithms to facilitate translation of these advanced treatment paradigms into clinical practice. To accelerate CT-guided X-ray therapies, Collapsed-Cone Convolution-Superposition (CCCS), a state-of-the-art analytical dose calculation algorithm, was accelerated through its novel implementation on highly parallelized GPUs. This context-based GPU-CCCS approach takes advantage of X-ray dose deposition compactness to parallelize calculation across hundreds of beamlets, reducing hardware-specific overheads, and enabling acceleration by two to three orders of magnitude compared to existing GPU-based beamlet-by-beamlet approaches. Near-linear increases in acceleration are achieved with a distributed, multi-GPU implementation of context-based GPU-CCCS. Dose calculation for MR-guided treatment is complicated by electron return effects (EREs), exhibited by ionizing electrons in the strong magnetic field of the MRI scanner. EREs necessitate the use of much slower Monte Carlo (MC) dose calculation, limiting the clinical application of advanced treatment paradigms due to time restrictions. An automatically distributed framework for very-large-scale MC dose calculation was developed, granting linear scaling of dose calculation speed with the number of utilized computational cores. It was then harnessed to efficiently generate a large dataset of paired high- and low-noise MC doses in a 1.5 tesla magnetic field, which were used to train a novel deep convolutional neural network (CNN), DeepMC, to predict low-noise dose from faster high-noise MC- simulation. DeepMC enables 38-fold acceleration of MR-guided X-ray beamlet dose calculation, while remaining synergistic with existing MC acceleration techniques to achieve multiplicative speed improvements. This work redefines the expectation of X-ray dose calculation speed, making it possible to apply new highly-beneficial treatment paradigms to standard clinical practice for the first time.

Author : Issam El Naqa
Publisher : Springer
Page : 336 pages
File Size : 46,55 MB
Release : 2015-06-19
Category : Medical
ISBN : 3319183052

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​This book provides a complete overview of the role of machine learning in radiation oncology and medical physics, covering basic theory, methods, and a variety of applications in medical physics and radiotherapy. An introductory section explains machine learning, reviews supervised and unsupervised learning methods, discusses performance evaluation, and summarizes potential applications in radiation oncology. Detailed individual sections are then devoted to the use of machine learning in quality assurance; computer-aided detection, including treatment planning and contouring; image-guided radiotherapy; respiratory motion management; and treatment response modeling and outcome prediction. The book will be invaluable for students and residents in medical physics and radiation oncology and will also appeal to more experienced practitioners and researchers and members of applied machine learning communities.

Author : Hidetaka Arimura
Publisher : Springer
Page : 383 pages
File Size : 43,99 MB
Release : 2017-01-26
Category : Medical
ISBN : 9811029458

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This book provides a comprehensive overview of the state-of-the-art computational intelligence research and technologies in computer-assisted radiation therapy based on image engineering. It also traces major technical advancements and research findings in the field of image-based computer-assisted radiation therapy. In high-precision radiation therapies, novel approaches in image engineering including computer graphics, image processing, pattern recognition, and computational anatomy play important roles in improving the accuracy of radiation therapy and assisting decision making by radiation oncology professionals, such as radiation oncologists, radiation technologists, and medical physicists, in each phase of radiation therapy. All the topics presented in this book broaden understanding of the modern medical technologies and systems for image-based computer-assisted radiation therapy. Therefore this volume will greatly benefit not only radiation oncologists and radiologists but also radiation technologists, professors in medical physics or engineering, and engineers involved in the development of products to utilize this advanced therapy.

Author : Gunilla C. Bentel
Publisher : Elsevier
Page : 273 pages
File Size : 28,6 MB
Release : 2014-02-20
Category : Health & Fitness
ISBN : 1483280411

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Treatment Planning and Dose Calculation in Radiation Oncology, Third Edition describes the treatment methods and technical guides as models of contemporary radiation therapy. These models should be modified for each individual patient to yield a best fit to the disease being treated and the radiation sources employed. This book is composed of seven chapters, and begins with an overview of the elements of clinical radiation oncology. The subsequent chapter deals with the production, interaction, and measurement of radiation. These topics are followed by intensive discussions of dose calculation for external beams and pretreatment procedures of radiation therapy. A chapter looks into the principles, apparatus, and dose calculation in brachytherapy. The final chapters describe the principles and practical applications of treatment planning. This book will be of value to radiation oncologists.

Author : Jun Deng
Publisher : CRC Press
Page : 289 pages
File Size : 11,93 MB
Release : 2019-03-07
Category : Science
ISBN : 1351801120

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Big Data in Radiation Oncology gives readers an in-depth look into how big data is having an impact on the clinical care of cancer patients. While basic principles and key analytical and processing techniques are introduced in the early chapters, the rest of the book turns to clinical applications, in particular for cancer registries, informatics, radiomics, radiogenomics, patient safety and quality of care, patient-reported outcomes, comparative effectiveness, treatment planning, and clinical decision-making. More features of the book are: Offers the first focused treatment of the role of big data in the clinic and its impact on radiation therapy. Covers applications in cancer registry, radiomics, patient safety, quality of care, treatment planning, decision making, and other key areas. Discusses the fundamental principles and techniques for processing and analysis of big data. Address the use of big data in cancer prevention, detection, prognosis, and management. Provides practical guidance on implementation for clinicians and other stakeholders. Dr. Jun Deng is a professor at the Department of Therapeutic Radiology of Yale University School of Medicine and an ABR board certified medical physicist at Yale-New Haven Hospital. He has received numerous honors and awards such as Fellow of Institute of Physics in 2004, AAPM Medical Physics Travel Grant in 2008, ASTRO IGRT Symposium Travel Grant in 2009, AAPM-IPEM Medical Physics Travel Grant in 2011, and Fellow of AAPM in 2013. Lei Xing, Ph.D., is the Jacob Haimson Professor of Medical Physics and Director of Medical Physics Division of Radiation Oncology Department at Stanford University. His research has been focused on inverse treatment planning, tomographic image reconstruction, CT, optical and PET imaging instrumentations, image guided interventions, nanomedicine, and applications of molecular imaging in radiation oncology. Dr. Xing is on the editorial boards of a number of journals in radiation physics and medical imaging, and is recipient of numerous awards, including the American Cancer Society Research Scholar Award, The Whitaker Foundation Grant Award, and a Max Planck Institute Fellowship.

Author : Björn Morén
Publisher : Linköping University Electronic Press
Page : 63 pages
File Size : 43,1 MB
Release : 2019-04-24
Category :
ISBN : 9176851311

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Cancer is a widespread type of diseases that each year affects millions of people. It is mainly treated by chemotherapy, surgery or radiation therapy, or a combination of them. One modality of radiation therapy is high dose-rate brachytherapy, used in treatment of for example prostate cancer and gynecologic cancer. Brachytherapy is an invasive treatment in which catheters (hollow needles) or applicators are used to place the highly active radiation source close to or within a tumour. The treatment planning problem, which can be modelled as a mathematical optimization problem, is the topic of this thesis. The treatment planning includes decisions on how many catheters to use and where to place them as well as the dwell times for the radiation source. There are multiple aims with the treatment and these are primarily to give the tumour a radiation dose that is sufficiently high and to give the surrounding healthy tissue and organs (organs at risk) a dose that is sufficiently low. Because these aims are in conflict, modelling the treatment planning gives optimization problems which essentially are multiobjective. To evaluate treatment plans, a concept called dosimetric indices is commonly used and they constitute an essential part of the clinical treatment guidelines. For the tumour, the portion of the volume that receives at least a specified dose is of interest while for an organ at risk it is rather the portion of the volume that receives at most a specified dose. The dosimetric indices are derived from the dose-volume histogram, which for each dose level shows the corresponding dosimetric index. Dose-volume histograms are commonly used to visualise the three-dimensional dose distribution. The research focus of this thesis is mathematical modelling of the treatment planning and properties of optimization models explicitly including dosimetric indices, which the clinical treatment guidelines are based on. Modelling dosimetric indices explicitly yields mixedinteger programs which are computationally demanding to solve. The computing time of the treatment planning is of clinical relevance as the planning is typically conducted while the patient is under anaesthesia. Research topics in this thesis include both studying properties of models, extending and improving models, and developing new optimization models to be able to take more aspects into account in the treatment planning. There are several advantages of using mathematical optimization for treatment planning in comparison to manual planning. First, the treatment planning phase can be shortened compared to the time consuming manual planning. Secondly, also the quality of treatment plans can be improved by using optimization models and algorithms, for example by considering more of the clinically relevant aspects. Finally, with the use of optimization algorithms the requirements of experience and skill level for the planners are lower. This thesis summary contains a literature review over optimization models for treatment planning, including the catheter placement problem. How optimization models consider the multiobjective nature of the treatment planning problem is also discussed.

Author : Frank Verhaegen
Publisher : CRC Press
Page : 291 pages
File Size : 13,71 MB
Release : 2021-11-29
Category : Medical
ISBN : 1000455556

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About ten years after the first edition comes this second edition of Monte Carlo Techniques in Radiation Therapy: Introduction, Source Modelling, and Patient Dose Calculations, thoroughly updated and extended with the latest topics, edited by Frank Verhaegen and Joao Seco. This book aims to provide a brief introduction to the history and basics of Monte Carlo simulation, but again has a strong focus on applications in radiotherapy. Since the first edition, Monte Carlo simulation has found many new applications, which are included in detail. The applications sections in this book cover the following: Modelling transport of photons, electrons, protons, and ions Modelling radiation sources for external beam radiotherapy Modelling radiation sources for brachytherapy Design of radiation sources Modelling dynamic beam delivery Patient dose calculations in external beam radiotherapy Patient dose calculations in brachytherapy Use of artificial intelligence in Monte Carlo simulations This book is intended for both students and professionals, both novice and experienced, in medical radiotherapy physics. It combines overviews of development, methods, and references to facilitate Monte Carlo studies.